2013 Yılı Yayınları

kayıt
Yazarlar Makale Başlığı Dergi Adı Yıl Cilt Sayı Sayfa Sayfa Sonu
Mishra, A.K.; Tsachaki, M.; Rister, J.; Ng, J.; Çelik, A.; Sprecher, S.G. Binary cell fate decisions and fate transformation in the Drosophila larval eye PLOS GENETICS 2013 9
Li, X.; Erclik, T.; Chen, Z.; Venkatesh, S.; Morante, J.; Çelik, A.; Desplan, C. Temporal patterning of Drosophila medulla neuroblasts controls neural fates NATURE 2013 498 498 456
Okamoto, Y.; Goksungur, M.T.; Pehlivan, D.; Beck, C.R.; Gonzaga-Jauregui, C.; Muzny, D.M.; Atik, M.M.; Carvalho, C.M.; Matur, Z.; Bayraktar, S.; Boone, P.M.; Akyuz, K.; Gibbs, R.A.; Battaloglu, E.; Parman, Y.; Lupski, J.R. Exonic duplication CNV of NDRG1 associated with autosomal-recessive HMSN-Lom/CMT4D GENETICS IN MEDICINE 2013 16 16 386 394
Karahan, Ö.; Aviyente, V.; Avci, D.; Zijlstra, H.; Bickelhaupt, F.M. A Computational Study on the Reactivity Enhancement in the Free Radical Polymerization of Alkyl Hydroxymethacrylate and Acrylate Derivatives JOURNAL OF POLYMER SCIENCE PART A: POLYMER CHEMISTRY 2013 51 51 880 889
Degirmenci, I.; Tugba Furuncuoglu Ozaltın; Ozlem Karahan; Veronique Van Speybroeck; Michel Waroquier; Viktorya Aviyente Origins of the Solvent Effect on the Propagation Kinetics of Acrylic Acid and Methacrylic Acid JOURNAL OF POLYMER SCIENCE PART A: POLYMER CHEMISTRY 2013 51 51 2024 2034
Mehtap Isık; Ozlem Karahan; Duygu Avci; Viktorya Aviyente Computational Approach to the Free Radical Polymerization Kinetics of Alkyl-Hydroxymethacrylate Monomers: A Structure–Reactivity Relationship JOURNAL OF POLYMER SCIENCE PART A: POLYMER CHEMISTRY 2013 51 51 2375 2384
A. Altin; B. Akgun; O. Buyukgumus; Z. Sarayli Bilgici; S. Agopcan; D. Avci Synthesis and Photopolymerizations of Novel Highly Reactive Phosphonated-urea-methacrylates for Dental Materials REACTIVE AND FUNCTIONAL POLYMERS 2013 73 73 1319
Z. Sarayli Bilgici; S. Begum Turker; D. Avci Novel Bisphosphonated Methacrylates: Synthesis, Polymerizations, and Interactions with Hydroxyapatite MACROMOLECULAR CHEMISTRY AND PHYSICS 2013 214 214 2324
Dedeoglu, B. Ugur; I. Degirmenci; V. Aviyente; B. Barcin; G. Cayli; H.Y. Acar First RAFT polymerization of captodative 2-acetamidoacrylic acid (AAA) monomer: An experimental and theoretical study POLYMER 2013 54 54 5122 5132
C. Özen; A. Yıldırım; N. Ş. Tüzün; P. Haslak; E. Doğan; E. Acar; V. Aviyente Prediction of the 1H NMR spectra of epoxy-fused cyclopentane derivatives by calculations of chemical shifts and spin–spin coupling constants MOLECULAR PHYSICS 2013 111 111 3147 3155
H. Torun; S. Sadeghzadeh; A.D. Yalcinkaya Tunable overlapping half-ring resonator REVIEW OF SCIENTIFIC INSTRUMENTS 2013 84 84
Ozguc, C.; Helvacioglu, E.; Nugay, N.; Nugay, T. Synthesis and Characterization of Poly(N-isopropylacrylamide) and Poly(vinyl acetate) Diblock Copolymers via MADIX Process MACROMOLECULAR SYMPOSIA 2013 323 323 18 25
Aydınoğlu, D.; Şen, S.; Helvacıoğlu, D.; Nugay, T.; Nugay, N. Tuning of Heavy Metal Removal Efficiency from Water via Micro Algae/Hydrogel Composites E-POLYMERS 2013 16 16 1 17
Nugay, N.; Nugay, T.; Kennedy, J.P. Minute amounts of organically modified montmorillonite improve the properties of polyisobutylene-based polyurethanes JOURNAL OF POLYMER SCIENCE PART A: POLYMER CHEMISTRY 2013 51 51 4076 4087
Ozcan, O.; Uyar, A.; Doruker, P.; Akten, E.D. Effect of intracellular loop 3 on intrinsic dynamics of human beta2-adrenergic receptor BMC STRUCTURAL BIOLOGY 2013 13 13
Kurkcuoglu, Z.; Doruker, P. Substrate Effect on Catalytic and Global Dynamics of Triosephosphate Isomerase ENTROPY 2013 15 15 1085 1099
Ozbek, P.; Soner, S.; Haliloglu, T. Hot spots in a network of functional sites PLOS ONE 2013 8 8
Aykac Fas, B.; Tutar, Y.; Haliloglu, T. Dynamic Fluctuations Provide the Basis of a Conformational Switch Mechanism in Apo Cyclic AMP Receptor Protein PLOS COMPUTATIONAL BIOLOGY 2013 9 9
Kaya, C.; Armutlulu, A.; Ekesan, S.; Haliloglu, T. MCPath: Monte Carlo path generation approach to predict likely allosteric pathways and functional residues NUCLEIC ACIDS RESEARCH 2013 41 41
Soner, S.; Özturan, C. Integer Programming Based Heterogeneous CPU-GPU Cluster Schedulers for SLURM Resource Manager JOURNAL OF COMPUTER AND SYSTEM SCIENCES 2013
Begum Alaybeyoglu; Deniz Meneksedag; Berna Sariyar Akbulut; Elif Ozkirimli A novel antimicrobial peptide 2013
A.U. Cakaci; M.H.M. Kouhani; H. Torun; A.D. Yalcinkaya An Electromagnetic MEMS Based Resonator Design for Catheter Tracking in MRI TECHNICAL DIGEST OF THE 24TH MICROMECHANICS AND MICROSYSTEMS EUROPE CONFERENCE 2013
RB Erarslan; U. Adiyan; SZ Lulec; S. Olcer; Y. Temiz; Y. Leblebici; H. Torun; H. Urey Design and characterization of micromachined sensor array integrated with CMOS based optical readout SENSOR ACTUAT A-PHYS 2013
M. Tumer; B. Sarioglu; S. Mutlu; A.D. Yalcinkaya; C. Ozturk LARFET (Low Amplitude RF at Echo Time) for Catheter Tracking PROCEEDINGS OF THE 21ST ANNUAL MEETING OF THE INTERNATIONAL SOCIETY FOR MAGNETIC RESONANCE IN MEDICINE (ISMRM) 2013
C. Kasap; M.L. Arslan A unified approach to speech enhancement and voice activity detection TURKISH JOURNAL OF ELECTRICAL ENGINEERING AND COMPUTER SCIENCES 2013 21 527 547
Yalcinkaya, M.; Yüksel, Ş. Investigation of LL-37 Mediated siRNA Transfection TURKISH JOURNAL OF BIOLOGY 2013 37 426
Topaloğlu, N.; Gülsoy, M.; Yüksel, Ş. Antimicrobial Photodynamic Therapy of Resistant Bacterial Strains by Indocyanine Green and 809-nm Diode Laser PHOTOMEDICINE AND LASER SURGERY 2013 4 31
Yüksel, Ş.; Eren, E.; Hatemi, G.; Sahillioglu, A.; Gultekin, Y.; Demiroz, D.; Akdis, C.; Fresko, I.; Özören, N. The Cryopyrin (CIAS1/NALP3) Novel NLRP3/Cryopyrin Mutations and Pro-inflammatory Cytokine Profiles in Behcet’s Syndrome Patients INTERNATIONAL IMMUNOLOGY JOURNAL 2013
Ozansoy, Mehmet; Başak, A.N. The Central Theme Of Parkinson Disease: Alpha-Synuclein MOLECULAR NEUROBIOLOGY 2013 2 47 460
Wang, S.; Chen, K.; Kayıtmazer, A.B.; Li, L.; Guo, X. Tunable adsorption of bovine serum albumin by annealed cationic spherical polyelectrolyte brushes COLLOIDS SURF B BIOINTERFACES 2013 107 251 256
Kayitmazer, A.B.; Seeman, D.; Minsky, B.B.; Dubin, P.L.; Xu, Y. Protein-Polyelectrolyte Interactions SOFT MATTER 2013 9 9 2553 2583
Agim, Zeynep Sena; Esendal, Melda; Uyan, Ozgun; Meschian, Mehran; Martinez, Luis Antonio Mendoza; Ding, Yongmei; Basak, A.N.; Ozcelik, Hilmi Discovery, Validation And Characterization Of Erbb4 And Nrg1 Haplotypes Using Data From Three Genome-Wide Association Studies Of Schizophrenia PLOS ONE 2013
Uyan, Özgün; Omur, Ozgur; Agim, Zeynep Sena; Ozoguz, Aslıhan; Li, Hong; Parman, Yesim; Deymeer, Feza; Oflazer, Piraye; Koc, Filiz; Tan, Ersin; Ozcelik, Hilmi; Basak, A.N. Genome-Wide Copy Number Variation in Sporadic Amyotrophic Lateral Sclerosis in the Turkish Population: Deletion of EPHA3 Is a Possible Protective Factor PLOS ONE 2013 8 8
Gultekin, Yetiş; Eren, Elif; Özören, Nesrin NLRC3 Acts as an Anti-Inflammatory Cytosolic Receptor JOURNAL OF INNATE IMMUNITY 2013
Bakış, Y.; Otu, H.H.; Taşcı, N.; Meydan, C.; Bilgin, N.; Yüzbaşıoğlu, S.; Sezerman, U. Testing robustness of relative complexity measure method constructing robust phylogenetic trees for Galanthus L. using the relative complexity measure BMC BIOINFORMATICS 2013 14 20 37
Taşçı, N. Margoz; Yüzbaşıoğlu, İ.S.; Çelen, Z.; Ekim, T.; Bilgin, A.N. Molecular phylogeny of Galanthus (Amaryllidaceae) of Anatolia inferred from multiple nuclear and chloroplast DNA regions TURKISH JOURNAL OF BOTANY 2013 37 993 1007
Kempe, K.; Onbulak, S.; Schubert, U.S.; Sanyal, A.; Hoogenboom, R. pH Degradable Dendron-functionalized poly(2-ethyl-2-oxazoline) Prepared by a Cascade ‘Double-Click’ Reaction POLYMER CHEMISTRY 2013 4 3236 3244
Topaloglu, Nermin; Yuksel, Sahru; Gulsoy, Murat Antimicrobial Photodynamic Therapy of Resistant Bacterial Strains by Indocyanine Green and 809-nm Diode Laser PHOTOMEDICINE AND LASER SURGERY 2013 31 155 162
Dikici, Erinc; Semerci, Murat; Saraclar, Murat; Alpaydin, Ethem Classification and Ranking Approaches to Discriminative Language Modeling for ASR IEEE TRANSACTIONS ON AUDIO SPEECH AND LANGUAGE PROCESSING 2013 21 291 300
Tunc, Burcu; Gulsoy, Murat Fiber laser ablation with real-time temperature monitoring for minimizing collateral thermal damage: ex vivo dosimetry for ovine brain LASERS IN SURGERY AND MEDICINE 2013 45 48 56
Gurol, Omer C.; Sankur, Acar; Guney, Mehmet Efficient estimation of disparity statistics and their use as a predictor for perceived 3d video scene quality EURASIP JOURNAL ON IMAGE AND VIDEO PROCESSING 2013 1 12
Aydin, Cagatay; Oktay, Oytun; Gunebakan, Adem Umut; Ademoglu, Ahmet; Ciftci, Rifat Role of Alpha Oscillations During Short Time Memory Task Investigated by Graph Based Partitioning RADIOENGINEERING 2013 22 123 131
Devecioglu, Ismail; Devecioglu, Ismail Guclu; Burak Asymmetric response properties of rapidly adapting mechanoreceptive fibers in the rat glabrous skin SOMATOSENSORY AND MOTOR RESEARCH 2013 30 16 29
Guclu, Burak; Dincer, S. Mete Neural coding in the Non-Pacinian I tactile channel: A psychophysical and simulation study of magnitude SOMATOSENSORY AND MOTOR RESEARCH 2013 30 1 15
Yildiz, Mustafa Zahid; Guclu, Burak Relationship between vibrotactile detection threshold in the Pacinian channel and complex mechanical modulus of the human glabrous skin SOMATOSENSORY AND MOTOR RESEARCH 2013 30 37 47
Goksel-Duru, Dilek; Ozkan, Mehmed Application of Self-Organizing Artificial Neural Networks on Simulated Diffusion Tensor Images MATHEMATICAL PROBLEMS IN ENGINEERING 2013
Kiziloz, Burcu Kaya; Tekcan, Ali I. Canonical Categories in Flashbulb Memories APPLIED COGNITIVE PSYCHOLOGY 2013 27 352 359
Yaman, Ozturk; Cengizhan; Huijing, Peter A.; Yucesoy, Can A. Magnetic Resonance Imaging Assessment of Mechanical Interactions Between Human Lower Leg Muscles in Vivo JOURNAL OF BIOMECHANICAL ENGINEERING-TRANSACTIONS OF THE ASM 2013 135
Sen, Ipek; Saraclar, Murat; Kahya, Yasemin P. Exploring an optimal vector autoregressive model for multi-channel pulmonary sound data COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2013 111 550 560
Ates, F.; Özdeşlik, R.N.; Huijing, P.A.; Yucesoy, C.A. Muscle lengthening surgery causes differential acute mechanical effects in both targeted and non-targeted synergistic muscles JOURNAL OF ELECTROMYOGRAPHY AND KINESIOLOGY 2013 23 1198 1205
Yaman, A.; Ozturk, C.; Huijing, P.A.; Yucesoy, C.A. MRI Assessment of Mechanical Interactions Between Human Lower Leg Muscles in vivo JOURNAL OF BIOMECHANICAL ENGINEERING 2013 135 1 9
Demir, Cemil; Saraclar, Murat; Cemgil, Ali Taylan Single-Channel Speech-Music Separation for Robust ASR With Mixture Models IEEE TRANSACTIONS ON AUDIO SPEECH AND LANGUAGE PROCESSING 2013 21 725 736
Mermer, Coskun; Saraclar, Murat; Sarikaya, Ruhi Improving Statistical Machine Translation Using Bayesian Word Alignment and Gibbs Sampling IEEE TRANSACTIONS ON AUDIO SPEECH AND LANGUAGE PROCESSING 2013 21 1090 1101
Ates, F.; Yucesoy, C.A. Effects of BTX-A on non-injected bi-articular muscle include a narrower length range of force exertion and increased passive force MUSCLE AND NERVE 2013
Meneksedag, Deniz; Dogan, Asligul; Kanlikilicer, Pinar; Ozkirimli, Elif Communication between the active site and the allosteric site in class A beta-lactamases COMPUTATIONAL BIOLOGY AND CHEMISTRY 2013 43 1 10
Ates, F.; Temelli, Y.; Yucesoy, C.A. Human spastic Gracilis muscle isometric forces measured intraoperatively as a function of knee angle show no abnormal muscular mechanics CLINICAL BIOMECHANICS 2013 28 48 54
Yucesoy, C.A.; Seref, Z.; Huijing, P.A. In muscle lengthening surgery multiple aponeurotomy does not improve intended acute effects and may counter-indicated: an assessment by finite element modeling COMPUTER METHODS IN BIOMECHANICS AND BIOMEDICAL ENGINEERING 2013 16 12 25
Gonen, Mehmet; Alpaydin, Ethem Localized algorithms for multiple kernel learning PATTERN RECOGNITION 2013 46 795 807
Kabas, Ayse; Ersoy, Tansu; Gulsoy, Murat; Akturk, Selcuk Femtosecond laser etching of dental enamel for bracket bonding JOURNAL OF BIOMEDICAL OPTICS 2013 18
Jeong, Youngdo; Patra, Debabrata; Sanyal, Amitav; Rotello, Vincent M. Fabrication of Stable Nanoparticle-Based Colloidal Microcapsules CURRENT ORGANIC CHEMISTRY 2013 17 49 57
Tonga, M.; Yesilbag, G.; Seber, G.; Sanyal, A. Dendronized Polystyrene via Orthogonal Double-Click Reactions JOURNAL OF POLYMER SCIENCE PART A: POLYMER CHEMISTRY 2013 51 5029 5037
Gok, O.; Yigit, S.; Kose, M. M.; Sanyal, R.; Sanyal, A. Dendron-Polymer Conjugates via the Diels-Alder ‘Click’ Reaction of Novel Anthracene-based Dendrons JOURNAL OF POLYMER SCIENCE PART A: POLYMER CHEMISTRY 2013 4 3191 3201
Baradel, N.; Gok, O.; Zamfir, M.; Sanyal, A.; Lutz, J.-F. Sequence-controlled Polymerizations Using Dendritic Macromonomers: Precise Chain-Positioning of Bulky Functional Clusters CHEMICAL COMMUNICATIONS 2013 49 7280 7282
Jeong, Y.; Patra, D.; Sanyal, A.; Rotello, V. M. Fabrication of Stable Nanoparticle-Based Colloidal Microcapsules CURRENT ORGANIC CHEMISTRY 2013 49 57
Cengiz, N.; Rao, J.; Sanyal, A.; Khan, A. Designing functionalizable hydrogels through thiol-epoxy coupling chemistry CHEMICAL COMMUNICATIONS 2013 49 11191 11193
Meral, Cihan; Caglayan, Hande S.; … De Novo Loss-of-Function Mutations in CHD2 Cause a Fever-Sensitive Myoclonic Epileptic Encephalopathy AMERICAN JOURNAL OF HUMAN GENETICS 2013 93 967 975
Akdag, Ihsan Omur; Ozkirimli, Elif The Uptake Mechanism of the Cell-Penetrating pVEC Peptide JOURNAL OF CHEMISTRY 2013
Topaloglu, Nermin; Yuksel, Sahru; Gulsoy, Murat Influence of different output powers on the efficacy of photodynamic therapy with 809-nm diode laser and indocyanine green OPTICAL INTERACTIONS WITH TISSUE AND CELLS 2013 24
Tunc, Burcu; Gulsoy, Murat Determination of the ablation efficiencies of the laser irradiated tissues via rate of temperature change over time ENERGY-BASED TREATMENT OF TISSUE AND ASSESSMENT VII 2013 8584
Marvasti, Neda B.; Acar, Burak Assessment of MRF Based Joint Scale Selection and Segmentation for 3D Liver Vessel Segmentation Task 21ST SIGNAL PROCESSING AND COMMUNICATIONS APPLICATIONS 2013
Dikici, Erinc; Saraclar, Murat Curriculum Based Discriminative Language Model Training 21ST SIGNAL PROCESSING AND COMMUNICATIONS APPLICATIONS 2013
Aysan, Nuray; Topaloglu, Nermin; Yuksel, Sahru; Gulsoy, Murat Biostimulative effect of 809-nm diode laser and indocyanine green on p.aeruginosa instead of photodynamic therapy MECHANISMS FOR LOW-LIGHT THERAPY VIII 2013 8569
Praetorius, C.; Grill, C.; Stacey, SN; …; Stefansson, K.; Sturm, RA; Steingrímsson, E. IRF4 affects human pigmentation by regulating expression of Tyrosinase through a MITF/TFAP2A-dependent pathway CELL 2013 155 1022 1033
Lamy, L.; Ngo, VN; Emre, NCT; …; Staudt, LM Control of autophagic cell death by caspase-10 in multiple myeloma CANCER CELL 2013 23 435 449
Misiti, T.; Tandukar, M.; Tezel, U.; Pavlostathis, S. G. Inhibition and biotransformation potential of naphthenic acids under different electron accepting conditions WATER RESEARCH 2013 47 406 418
Misiti, T.; Tezel, U.; Tandukar, M.; Pavlostathis, S. G. Aerobic biotransformation potential of a commercial mixture of naphthenic acids WATER RESEARCH 2013 47 5520 5534
Tandukar, M.; Oh, S.; Tezel, U.; Konstantinidis, K. T.; Pavlostathis, S. G. Long-term exposure to benzalkonium chloride disinfectants results in change of microbial community structure and increased antimicrobial resistance ENVIRONMENTAL SCIENCE AND TECHNOLOGY 2013 47 9730
Hong, J.; Tezel, U.; Okutman Tas, D.; Pavlostathis, S. G. Influence of quaternary ammonium compounds on the microbial reductive dechlorination of pentachloroaniline WATER RESEARCH 2013 47 6780 6789
Padhye, L. P.; Tezel, U. Fate of environmental pollutants WATER ENVIRONMENT RESEARCH 2013 85 1734 1785